Gene Symbol | COL12A1 |
---|---|
Entrez Gene | 1303 |
Alt Symbol | BA209D8.1, COL12A1L, DJ234P15.1 |
Species | Human |
Gene Type | protein-coding |
Description | collagen, type XII, alpha 1 |
Other Description | collagen alpha-1(XII) chain|collagen type XII proteoglycan |
Swissprots | Q5VYK2 Q71UR3 O43853 Q15955 Q99715 Q5VYK1 Q99716 |
Accessions | AAC83578 EAW48748 EAW48749 EAW48750 Q99715 AI752603 AJ420501 AK057081 AK307558 BC034534 BC034715 BC050587 AAH50587 BC146868 AAI46869 BP286308 DA661773 U68139 AAC01506 U73778 AAC51244 U73779 AAD40483 XM_011535434 XP_011533736 XM_011535435 XP_011533737 XM_011535436 XP_011533738 NM_004370 NP_004361 NM_080645 NP_542376 |
Function | Type XII collagen interacts with type I collagen- containing fibrils, the COL1 domain could be associated with the surface of the fibrils, and the COL2 and NC3 domains may be localized in the perifibrillar matrix. {ECO:0000250}. |
Subcellular Location | Secreted, extracellular space, extracellular matrix {ECO:0000250}. |
Tissue Specificity | Found in collagen I-containing tissues: both isoform 1 and isoform 2 appear in amnion, chorion, skeletal muscle, small intestine, and in cell culture of dermal fibroblasts, keratinocytes and endothelial cells. Only isoform 2 is found in lung, placenta, kidney and a squamous cell carcinoma cell line. Isoform 1 is also present in the corneal epithelial Bowman's membrane (BM) and the interfibrillar matrix of the corneal stroma, but it is not detected in the limbal BM. {ECO:0000269|PubMed:9344363}. |
Top Pathways | Protein digestion and absorption |
COL12A1 CRISPR/Cas9 KO Plasmid (h) - sc-402361 from Santa Cruz Biotechnology
|
||||||||
COL12A1 HDR Plasmid (h) - sc-402361-HDR from Santa Cruz Biotechnology
|
||||||||
COL12A1 Double Nickase Plasmid (h) - sc-402361-NIC from Santa Cruz Biotechnology
|
||||||||
COL12A1 Double Nickase Plasmid (h2) - sc-402361-NIC-2 from Santa Cruz Biotechnology
|
||||||||
COL12A1 CRISPR Activation Plasmid (h) - sc-402361-ACT from Santa Cruz Biotechnology
|
||||||||
COL12A1 CRISPR Activation Plasmid (h2) - sc-402361-ACT-2 from Santa Cruz Biotechnology
|
||||||||
COL12A1 Lentiviral Activation Particles (h) - sc-402361-LAC from Santa Cruz Biotechnology
|
||||||||
COL12A1 Lentiviral Activation Particles (h2) - sc-402361-LAC-2 from Santa Cruz Biotechnology
|
||||||||
COL12A1 siRNA (h) - sc-72958 from Santa Cruz Biotechnology
|
||||||||
COL12A1 shRNA Plasmid (h) - sc-72958-SH from Santa Cruz Biotechnology
|
||||||||
COL12A1 shRNA (h) Lentiviral Particles - sc-72958-V from Santa Cruz Biotechnology
|
||||||||
MISSION® esiRNA - EHU066591 from Sigma-Aldrich
|
||||||||
CompoZr® Knockout ZFN Kit - CKOZFN6369 from Sigma-Aldrich
|
||||||||
CompoZr® Knockout ZFN Kit, ZFN plasmid only - CKOZFND6369 from Sigma-Aldrich
|
||||||||
MISSION® 3′UTR Lenti GoClone™ - HUTR11084 from Sigma-Aldrich
|
||||||||
COL12A1 siRNA (Human) - CRH0917 from Cohesion Biosciences
|
||||||||
COL12A1 - MBS8232673 from MyBioSource
|
||||||||
shRNA set against Human COL12A1 (NM_004370.5) - SHH267041 from Creative biogene
|
||||||||
shRNA set against Human COL12A1(NM_080645.2) - SHG189617 from Creative biogene
|
||||||||
shRNA set against Human COL12A1(NM_004370.5) - SHG189653 from Creative biogene
|
||||||||
COL12A1 shRNA Plasmid (Human) - CHH0917 from Cohesion Biosciences
|
||||||||
COL12A1 miRNA 3'UTR clone - MiUTR1H-02301 from Creative biogene
|
||||||||
COL12A1 miRNA 3'UTR clone - MiUTR1H-02302 from Creative biogene
|