Gene Symbol | SMG6 |
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Entrez Gene | 23293 |
Alt Symbol | C17orf31, EST1A, SMG-6, hSMG5/7a |
Species | Human |
Gene Type | protein-coding |
Description | SMG6 nonsense mediated mRNA decay factor |
Other Description | EST1 telomerase component homolog A|ever shorter telomeres 1A|smg-6 homolog, nonsense mediated mRNA decay factor|telomerase subunit EST1A|telomerase-binding protein EST1A |
Swissprots | Q86VH6 B7Z874 Q86US8 Q9UF60 O94837 |
Accessions | CAH05610 EAW90557 EAW90559 Q86US8 AB018275 BAA34452 AK024131 BAB14835 AK074270 AK093007 AK302964 BAH13860 AL080204 AL133597 CAB63733 AU120859 AY145883 AAN46114 AY168921 AAO17581 BC064916 AAH64916 BC148373 AAI48374 DB333407 XM_005256569 XP_005256626 XM_005256570 XP_005256627 XM_005256571 XP_005256628 XM_006721494 XP_006721557 XM_006721495 XP_006721558 XM_011523769 XP_011522071 XM_011523770 XP_011522072 XM_011523771 XP_011522073 XM_011523772 XP_011522074 XM_011523773 XP_011522075 XM_011523774 XP_011522076 XM_011523775 XP_011522077 NM_001256827 NP_001243756 NM_001256828 NP_001243757 NM_001282326 NP_001269255 NM_017575 NP_060045 NM_001170957 |
Function | Component of the telomerase ribonucleoprotein (RNP) complex that is essential for the replication of chromosome termini. May have a general role in telomere regulation. Promotes in vitro the ability of TERT to elongate telomeres. Overexpression induces telomere uncapping, chromosomal end-to-end fusions (telomeric DNA persists at the fusion points) and did not perturb TRF2 telomeric localization. Binds to the single-stranded 5'- (GTGTGG)(4)GTGT-3' telomeric DNA, but not to a telomerase RNA template component (TER). |
Subcellular Location | Nucleus, nucleolus. Chromosome, telomere {ECO:0000305}. Cytoplasm, cytosol. Note=Particularly enriched in the nucleolus. |
Tissue Specificity | Ubiquitous. {ECO:0000269|PubMed:12676087, ECO:0000269|PubMed:12699629}. |
Top Pathways | mRNA surveillance pathway |
SMG6 CRISPR/Cas9 KO Plasmid (h) - sc-411705 from Santa Cruz Biotechnology
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SMG6 HDR Plasmid (h) - sc-411705-HDR from Santa Cruz Biotechnology
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SMG6 Double Nickase Plasmid (h) - sc-411705-NIC from Santa Cruz Biotechnology
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SMG6 Double Nickase Plasmid (h2) - sc-411705-NIC-2 from Santa Cruz Biotechnology
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SMG6 CRISPR Activation Plasmid (h) - sc-411705-ACT from Santa Cruz Biotechnology
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SMG6 CRISPR Activation Plasmid (h2) - sc-411705-ACT-2 from Santa Cruz Biotechnology
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SMG6 Lentiviral Activation Particles (h) - sc-411705-LAC from Santa Cruz Biotechnology
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SMG6 Lentiviral Activation Particles (h2) - sc-411705-LAC-2 from Santa Cruz Biotechnology
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SMG6 siRNA (h) - sc-61569 from Santa Cruz Biotechnology
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SMG6 shRNA Plasmid (h) - sc-61569-SH from Santa Cruz Biotechnology
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SMG6 shRNA (h) Lentiviral Particles - sc-61569-V from Santa Cruz Biotechnology
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SMG6 RNAi - H00023293-R01 from Novus Biologicals
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MISSION® esiRNA - EHU003801 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit - CKOZFN19791 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit, ZFN plasmid only - CKOZFND19791 from Sigma-Aldrich
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SMG6 siRNA (Human) - CRH8156 from Cohesion Biosciences
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SMG6 - MBS8200903 from MyBioSource
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shRNA set against Human SMG6 (NM_017575.4) - SHH413424 from Creative biogene
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shRNA set against Human SMG6(NM_017575.4) - SHL018710 from Creative biogene
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SMG6 shRNA Plasmid (Human) - CHH8156 from Cohesion Biosciences
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SMG6 miRNA 3'UTR clone - MiUTR1H-09661 from Creative biogene
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