| Gene Symbol | BATF |
|---|---|
| Entrez Gene | 10538 |
| Alt Symbol | B-ATF, BATF1, SFA-2, SFA2 |
| Species | Human |
| Gene Type | protein-coding |
| Description | basic leucine zipper transcription factor, ATF-like |
| Other Description | B-cell-activating transcription factor|SF-HT-activated gene 2 protein|activating transcription factor B|basic leucine zipper transcriptional factor ATF-like |
| Swissprots | Q16520 |
| Accessions | AAC78243 AAD51372 EAW81234 Q16520 BC032294 AAH32294 BP235761 D42106 BAA07686 U15460 AAC50314 NM_006399 NP_006390 |
| Function | AP-1 family transcription factor that controls the differentiation of lineage-specific cells in the immune system: specifically mediates the differentiation of T-helper 17 cells (Th17), follicular T-helper cells (TfH), CD8(+) dendritic cells and class-switch recombination (CSR) in B-cells. Acts via the formation of a heterodimer with JUNB that recognizes and binds DNA sequence 5'-TGA[CG]TCA-3'. The BATF-JUNB heterodimer also forms a complex with IRF4 (or IRF8) in immune cells, leading to recognition of AICE sequence (5'-TGAnTCA/GAAA-3'), an immune- specific regulatory element, followed by cooperative binding of BATF and IRF4 (or IRF8) and activation of genes. Controls differentiation of T-helper cells producing interleukin-17 (Th17 cells) by binding to Th17-associated gene promoters: regulates expression of the transcription factor RORC itself and RORC target genes such as IL17 (IL17A or IL17B). Also involved in differentiation of follicular T-helper cells (TfH) by directing expression |
| Subcellular Location | Nucleus {ECO:0000255|PROSITE- ProRule:PRU00978}. Cytoplasm {ECO:0000250}. Note=Present in the nucleus and cytoplasm, but shows increased nuclear translocation after activation of T-cells. {ECO:0000250}. |
| Tissue Specificity | Expressed at highest levels in lung, and at lower levels in placenta, liver, kidney, spleen, and peripheral blood. Detected in SW480 colorectal cancer cell line and several hematopoietic tumor cell lines, including Raji Burkitt's lymphoma. Strongly expressed in mature B- and T-lymphocytes. Also expressed in moderate levels in lymph node and appendix and at low levels in thymus and bone marrow (PubMed:10777209). {ECO:0000269|PubMed:10777209, ECO:0000269|PubMed:8570175, ECO:0000269|PubMed:8630063}. |
B-ATF CRISPR/Cas9 KO Plasmid (h) - sc-401553 from Santa Cruz Biotechnology
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B-ATF HDR Plasmid (h) - sc-401553-HDR from Santa Cruz Biotechnology
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B-ATF Double Nickase Plasmid (h) - sc-401553-NIC from Santa Cruz Biotechnology
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B-ATF Double Nickase Plasmid (h2) - sc-401553-NIC-2 from Santa Cruz Biotechnology
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B-ATF CRISPR Activation Plasmid (h) - sc-401553-ACT from Santa Cruz Biotechnology
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B-ATF CRISPR Activation Plasmid (h2) - sc-401553-ACT-2 from Santa Cruz Biotechnology
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B-ATF Lentiviral Activation Particles (h) - sc-401553-LAC from Santa Cruz Biotechnology
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B-ATF Lentiviral Activation Particles (h2) - sc-401553-LAC-2 from Santa Cruz Biotechnology
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B-ATF siRNA (h) - sc-45978 from Santa Cruz Biotechnology
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B-ATF shRNA Plasmid (h) - sc-45978-SH from Santa Cruz Biotechnology
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B-ATF shRNA (h) Lentiviral Particles - sc-45978-V from Santa Cruz Biotechnology
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MISSION® esiRNA - EHU043701 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit - CKOZFN3869 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit, ZFN plasmid only - CKOZFND3869 from Sigma-Aldrich
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MISSION® 3′UTR Lenti GoClone™ - HUTR02635 from Sigma-Aldrich
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BATF siRNA (Human) - CRH7163 from Cohesion Biosciences
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BATF RNAi - H00010538-R01 from Novus Biologicals
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BATF - MBS8228402 from MyBioSource
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shRNA set against Human BATF (NM_006399.3) - SHH244974 from Creative biogene
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Human BATF siRNA - orb267665 from Biorbyt
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BATF shRNA Plasmid (Human) - CHH7163 from Cohesion Biosciences
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BATF miRNA 3'UTR clone - MiUTR4H-TG00731 from Creative biogene
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