Gene Symbol | PATL1 |
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Entrez Gene | 219988 |
Alt Symbol | Pat1b, hPat1b |
Species | Human |
Gene Type | protein-coding |
Description | protein associated with topoisomerase II homolog 1 (yeast) |
Other Description | PAT1-like protein 1|protein PAT1 homolog 1|protein PAT1 homolog b |
Swissprots | Q2TA86 Q6P166 B3KXT9 Q86TB9 Q8N9M6 Q8NI63 |
Accessions | EAW73850 EAW73851 Q86TB9 AB065087 BAB93524 AK094193 BAC04305 AK127649 BAG54542 AK127943 BAG54601 AK293213 BAH11469 AL831992 CAD89916 AM392959 CAL37837 BC023255 BC048309 BC065264 AAH65264 BC109038 AAI09039 BC109039 AAI09040 BC111047 AAI11048 DC409866 XM_005273833 XP_005273890 XM_005273834 XP_005273891 XM_005273835 XP_005273892 XM_011544811 XP_011543113 NM_152716 NP_689929 |
Function | RNA-binding protein involved in deadenylation-dependent decapping of mRNAs, leading to the degradation of mRNAs. Acts as a scaffold protein that connects deadenylation and decapping machinery. Required for cytoplasmic mRNA processing body (P-body) assembly. In case of infection, required for translation and replication of hepatitis C virus (HCV). {ECO:0000269|PubMed:17936923, ECO:0000269|PubMed:19628699, ECO:0000269|PubMed:20543818, ECO:0000269|PubMed:20584987, ECO:0000269|PubMed:20852261}. |
Subcellular Location | Cytoplasm, P-body. Nucleus. Nucleus, PML body. Nucleus speckle. Note=Predominantly cytoplasmic. Shuttles between the nucleus and the cytoplasm in a CRM1-dependent manner. Enriched in splicing speckles. Localization to nuclear foci and speckles requires active transcription. Excluded from the nucleolus. |
Tissue Specificity | Ubiquitous. {ECO:0000269|PubMed:17936923}. |
Top Pathways | RNA degradation |
PATL1 CRISPR/Cas9 KO Plasmid (h) - sc-415098 from Santa Cruz Biotechnology
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PATL1 HDR Plasmid (h) - sc-415098-HDR from Santa Cruz Biotechnology
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PATL1 Double Nickase Plasmid (h) - sc-415098-NIC from Santa Cruz Biotechnology
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PATL1 Double Nickase Plasmid (h2) - sc-415098-NIC-2 from Santa Cruz Biotechnology
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PATL1 CRISPR Activation Plasmid (h) - sc-415098-ACT from Santa Cruz Biotechnology
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PATL1 CRISPR Activation Plasmid (h2) - sc-415098-ACT-2 from Santa Cruz Biotechnology
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PATL1 Lentiviral Activation Particles (h) - sc-415098-LAC from Santa Cruz Biotechnology
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PATL1 Lentiviral Activation Particles (h2) - sc-415098-LAC-2 from Santa Cruz Biotechnology
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PATL1 siRNA (h) - sc-96855 from Santa Cruz Biotechnology
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PATL1 shRNA Plasmid (h) - sc-96855-SH from Santa Cruz Biotechnology
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PATL1 shRNA (h) Lentiviral Particles - sc-96855-V from Santa Cruz Biotechnology
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CompoZr® Knockout ZFN Kit - CKOZFN16365 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit, ZFN plasmid only - CKOZFND16365 from Sigma-Aldrich
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MISSION® 3′UTR Lenti GoClone™ - HUTR09850 from Sigma-Aldrich
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PATL1 siRNA (Human) - CRJ6444 from Cohesion Biosciences
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shRNA set against Human PATL1 (NM_152716.2) - SHH371064 from Creative biogene
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Human PATL1 siRNA - orb276945 from Biorbyt
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PATL1 shRNA Plasmid (Human) - CHJ6444 from Cohesion Biosciences
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PATL1 miRNA 3'UTR clone - MiUTR3H-13345 from Creative biogene
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