Gene Symbol | CPSF6 |
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Entrez Gene | 11052 |
Alt Symbol | CFIM, CFIM68, HPBRII-4, HPBRII-7 |
Species | Human |
Gene Type | protein-coding |
Description | cleavage and polyadenylation specific factor 6, 68kDa |
Other Description | CPSF 68 kDa subunit|cleavage and polyadenylation specificity factor 68 kDa subunit|cleavage and polyadenylation specificity factor subunit 6|cleavage factor Im complex 68 kDa subunit|pre-mRNA cleavage factor I, 68kD subunit|pre-mRNA cleavage factor Im (68kD)|pre-mRNA cleavage factor Im 68 kDa subunit|protein HPBRII-4/7 |
Swissprots | Q53ES1 Q9BW18 Q16630 Q9BSJ7 A8K7K9 |
Accessions | CAA47751 CCQ43384 EAW97215 EAW97216 EAW97217 EAW97218 EAW97219 Q16630 AK021534 AK021833 AK098338 AK223568 BAD97288 AK292024 BAF84713 AK299928 BAG61761 AW189370 BC000714 AAH00714 BC005000 AAH05000 DA365448 DQ892159 ABM83085 EU176688 ABW03489 X67337 CAA47752 XM_005268588 XP_005268645 XM_005268590 XP_005268647 NM_001300947 NP_001287876 NM_007007 NP_008938 |
Function | Component of the cleavage factor Im complex (CFIm) that plays a key role in pre-mRNA 3'-processing. Involved in association with NUDT21/CPSF5 in pre-MRNA 3'-end poly(A) site cleavage and poly(A) addition. CPSF6 binds to cleavage and polyadenylation RNA substrates and promotes RNA looping. {ECO:0000269|PubMed:14690600, ECO:0000269|PubMed:20695905, ECO:0000269|PubMed:21295486, ECO:0000269|PubMed:8626397, ECO:0000269|PubMed:9659921}. |
Subcellular Location | Nucleus {ECO:0000269|PubMed:15169763, ECO:0000269|PubMed:20695905, ECO:0000269|PubMed:9659921}. Note=In punctate subnuclear structures localized adjacent to nuclear speckles, called paraspeckles. |
Top Pathways | mRNA surveillance pathway |
CPSF6 CRISPR/Cas9 KO Plasmid (h) - sc-404919 from Santa Cruz Biotechnology
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CPSF6 HDR Plasmid (h) - sc-404919-HDR from Santa Cruz Biotechnology
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CPSF6 Double Nickase Plasmid (h) - sc-404919-NIC from Santa Cruz Biotechnology
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CPSF6 Double Nickase Plasmid (h2) - sc-404919-NIC-2 from Santa Cruz Biotechnology
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CPSF6 CRISPR Activation Plasmid (h) - sc-404919-ACT from Santa Cruz Biotechnology
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CPSF6 CRISPR Activation Plasmid (h2) - sc-404919-ACT-2 from Santa Cruz Biotechnology
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CPSF6 Lentiviral Activation Particles (h) - sc-404919-LAC from Santa Cruz Biotechnology
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CPSF6 Lentiviral Activation Particles (h2) - sc-404919-LAC-2 from Santa Cruz Biotechnology
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CPSF6 siRNA (h) - sc-72990 from Santa Cruz Biotechnology
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CPSF6 shRNA Plasmid (h) - sc-72990-SH from Santa Cruz Biotechnology
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CPSF6 shRNA (h) Lentiviral Particles - sc-72990-V from Santa Cruz Biotechnology
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CPSF6 RNAi - H00011052-R01 from Novus Biologicals
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MISSION® esiRNA - EHU071541 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit - CKOZFN6528 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit, ZFN plasmid only - CKOZFND6528 from Sigma-Aldrich
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MISSION® 3′UTR Lenti GoClone™ - HUTR10374 from Sigma-Aldrich
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CPSF6 siRNA (Human) - CRH7552 from Cohesion Biosciences
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CPSF6 - MBS8228552 from MyBioSource
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shRNA set against Human CPSF6 (NM_007007.2) - SHH268977 from Creative biogene
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shRNA set against Human CPSF6(NM_007007.2) - SHG170947 from Creative biogene
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CPSF6 shRNA Plasmid (Human) - CHH7552 from Cohesion Biosciences
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CPSF6 miRNA 3'UTR clone - MiUTR1H-02401 from Creative biogene
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