Gene Symbol | ATG4D |
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Entrez Gene | 84971 |
Alt Symbol | APG4-D, APG4D, AUTL4 |
Species | Human |
Gene Type | protein-coding |
Description | autophagy related 4D, cysteine peptidase |
Other Description | APG4 autophagy 4 homolog D|ATG4 autophagy related 4 homolog D|AUT-like 4 cysteine endopeptidase|autophagin-4|autophagy-related cysteine endopeptidase 4|autophagy-related protein 4 homolog D|cysteine protease ATG4D|cysteine protease involved in autophagy |
Swissprots | Q969K0 Q86TL0 |
Accessions | EAW84116 EAW84117 EAW84118 EAW84119 Q86TL0 AJ312332 CAC85951 AK056210 BAB71121 AK223383 BAD97103 AK294676 BAG57839 AK314712 AK316454 BAH14825 BC007639 AAH07639 BC016845 AAH16845 BC068992 AAH68992 BM671285 HQ447598 ADQ32084 HY063028 JF432562 ADZ15779 XM_006722927 XP_006722990 NM_001281504 NP_001268433 NM_032885 NP_116274 NR_104024 NR_104025 |
Function | Cysteine protease ATG4D: Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. Cleaves the C-terminal amino acid of ATG8 family proteins MAP1LC3 and GABARAPL2, to reveal a C-terminal glycine. Exposure of the glycine at the C-terminus is essential for ATG8 proteins conjugation to phosphatidylethanolamine (PE) and insertion to membranes, which is necessary for autophagy. Has also an activity of delipidating enzyme for the PE-conjugated forms. |
Subcellular Location | Cysteine protease ATG4D: Cytoplasm. |
Tissue Specificity | Mainly expressed in skeletal muscle and, to a lower extent, in testis. {ECO:0000269|PubMed:12446702}. |
Top Pathways | Regulation of autophagy |
Atg4D CRISPR/Cas9 KO Plasmid (h) - sc-413750 from Santa Cruz Biotechnology
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Atg4D HDR Plasmid (h) - sc-413750-HDR from Santa Cruz Biotechnology
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Atg4D Double Nickase Plasmid (h) - sc-413750-NIC from Santa Cruz Biotechnology
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Atg4D Double Nickase Plasmid (h2) - sc-413750-NIC-2 from Santa Cruz Biotechnology
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Atg4D CRISPR Activation Plasmid (h) - sc-413750-ACT from Santa Cruz Biotechnology
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Atg4D CRISPR Activation Plasmid (h2) - sc-413750-ACT-2 from Santa Cruz Biotechnology
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Atg4D Lentiviral Activation Particles (h) - sc-413750-LAC from Santa Cruz Biotechnology
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Atg4D Lentiviral Activation Particles (h2) - sc-413750-LAC-2 from Santa Cruz Biotechnology
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Atg4D siRNA (h) - sc-97728 from Santa Cruz Biotechnology
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Atg4D shRNA Plasmid (h) - sc-97728-SH from Santa Cruz Biotechnology
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Atg4D shRNA (h) Lentiviral Particles - sc-97728-V from Santa Cruz Biotechnology
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MISSION® esiRNA - EHU035721 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit - CKOZFN3654 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit, ZFN plasmid only - CKOZFND3654 from Sigma-Aldrich
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ATG4D siRNA (Human) - CRJ3738 from Cohesion Biosciences
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ATG4D - MBS8225828 from MyBioSource
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shRNA set against Human ATG4D (NM_032885.4) - SHH242150 from Creative biogene
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shRNA set against Human ATG4D(NM_032885.4) - SHG080029 from Creative biogene
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ATG4D shRNA Plasmid (Human) - CHJ3738 from Cohesion Biosciences
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ATG4D miRNA 3'UTR clone - MiUTR1H-00664 from Creative biogene
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