Gene Symbol | PDE6D |
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Entrez Gene | 5147 |
Alt Symbol | JBTS22, PDED |
Species | Human |
Gene Type | protein-coding |
Description | phosphodiesterase 6D, cGMP-specific, rod, delta |
Other Description | GMP-PDE delta|protein p17|retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta |
Swissprots | O43250 O43924 |
Accessions | AAC25953 AAC39720 AAY24151 EAW70977 EAW70978 O43924 AF022912 AAB87872 AK311623 BC001054 BC007831 AAH07831 BC017467 BI754373 BT007278 AAP35942 CR456980 CAG33261 DQ893223 ABM84149 DQ896553 ABM87552 HY037751 XM_011511342 XP_011509644 NM_001291018 NP_001277947 NM_002601 NP_002592 NR_110994 |
Function | Promotes the release of prenylated target proteins from cellular membranes (PubMed:9712853). Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location (PubMed:22002721, PubMed:23698361). Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E (PubMed:24166846). Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI) (By similarity). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide dissociation rate (By similarity). {ECO:0000250|UniProtKB:O55057, ECO:0000269|PubMed:10518933, ECO:0000269|PubMed:22002721, ECO:0000269|PubMed:23559067, ECO:0000269|PubMed:23698361, ECO:0000269|PubMed:24166846, ECO:0000269|PubMed:9712853}. |
Subcellular Location | Cytoplasm, cytosol {ECO:0000269|PubMed:22002721, ECO:0000269|PubMed:23698361, ECO:0000269|PubMed:9712853}. Cytoplasmic vesicle membrane {ECO:0000269|PubMed:9712853}; Peripheral membrane protein {ECO:0000269|PubMed:9712853}. Cytoplasm, cytoskeleton, cilium basal body {ECO:0000269|PubMed:24166846}. |
Tissue Specificity | Widely expressed. Detected in various tissues including spleen, prostate gland, testis, ovary, small intestine, colon, retina, and peripheral blood. {ECO:0000269|PubMed:9712853}. |
Top Pathways | Purine metabolism |
PDE6D CRISPR/Cas9 KO Plasmid (h) - sc-418288 from Santa Cruz Biotechnology
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PDE6D HDR Plasmid (h) - sc-418288-HDR from Santa Cruz Biotechnology
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PDE6D Double Nickase Plasmid (h) - sc-418288-NIC from Santa Cruz Biotechnology
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PDE6D Double Nickase Plasmid (h2) - sc-418288-NIC-2 from Santa Cruz Biotechnology
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PDE6D CRISPR Activation Plasmid (h) - sc-418288-ACT from Santa Cruz Biotechnology
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PDE6D CRISPR Activation Plasmid (h2) - sc-418288-ACT-2 from Santa Cruz Biotechnology
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PDE6D Lentiviral Activation Particles (h) - sc-418288-LAC from Santa Cruz Biotechnology
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PDE6D Lentiviral Activation Particles (h2) - sc-418288-LAC-2 from Santa Cruz Biotechnology
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PDE6D siRNA (h) - sc-61309 from Santa Cruz Biotechnology
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PDE6D shRNA Plasmid (h) - sc-61309-SH from Santa Cruz Biotechnology
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PDE6D shRNA (h) Lentiviral Particles - sc-61309-V from Santa Cruz Biotechnology
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PDE6D RNAi - H00005147-R01 from Novus Biologicals
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MISSION® esiRNA - EHU132211 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit - CKOZFN16542 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit, ZFN plasmid only - CKOZFND16542 from Sigma-Aldrich
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MISSION® 3′UTR Lenti GoClone™ - HUTR05219 from Sigma-Aldrich
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PDE6D siRNA (Human) - CRH3427 from Cohesion Biosciences
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shRNA set against Human PDE6D (NM_002601.2) - SHH372536 from Creative biogene
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shRNA set against Human PDE6D(NM_002601.2) - SHR100710 from Creative biogene
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PDE6D shRNA Plasmid (Human) - CHH3427 from Cohesion Biosciences
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PDE6D miRNA 3'UTR clone - MiUTR1H-07716 from Creative biogene
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