Gene Symbol | SRRM1 |
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Entrez Gene | 10250 |
Alt Symbol | 160-KD, POP101, SRM160 |
Species | Human |
Gene Type | protein-coding |
Description | serine/arginine repetitive matrix 1 |
Other Description | SR-related nuclear matrix protein of 160 kDa|Ser/Arg-related nuclear matrix protein|serine/arginine repetitive matrix protein 1 |
Swissprots | Q5VVN4 O60585 Q8IYB3 |
Accessions | EAW95138 EAW95139 EAW95140 Q8IYB3 AA744578 AF048977 AAC09321 AF419855 AAP97290 AK293576 BAG57046 AK302498 BAH13726 AK307419 AK307568 AW958761 BC011019 BC017315 BC036187 AAH36187 BC107072 BG178896 BG720378 CX782666 DC353932 XM_005245717 XP_005245774 XM_005245718 XP_005245775 XM_005245720 XP_005245777 XM_005245721 XP_005245778 XM_005245722 XP_005245779 XM_011540478 XP_011538780 XM_011540479 XP_011538781 XM_011540480 XP_011538782 XM_011540481 XP_011538783 XM_011540482 XP_011538784 XM_011540483 XP_011538785 XR_241183 NM_001303448 NP_001290377 NM_001303449 NP_001290378 NM_005839 NP_005830 |
Function | Part of pre- and post-splicing multiprotein mRNP complexes. Involved in numerous pre-mRNA processing events. Promotes constitutive and exonic splicing enhancer (ESE)-dependent splicing activation by bridging together sequence-specific (SR family proteins, SFRS4, SFRS5 and TRA2B/SFRS10) and basal snRNP (SNRP70 and SNRPA1) factors of the spliceosome. Stimulates mRNA 3'-end cleavage independently of the formation of an exon junction complex. Binds both pre-mRNA and spliced mRNA 20-25 nt upstream of exon-exon junctions. Binds RNA and DNA with low sequence specificity and has similar preference for either double- or single-stranded nucleic acid substrates. {ECO:0000269|PubMed:10339552, ECO:0000269|PubMed:10668804, ECO:0000269|PubMed:11739730, ECO:0000269|PubMed:12600940, ECO:0000269|PubMed:12944400, ECO:0000269|PubMed:9531537}. |
Subcellular Location | Nucleus matrix. Nucleus speckle. |
Top Pathways | RNA transport, mRNA surveillance pathway |
SRm160 CRISPR/Cas9 KO Plasmid (h) - sc-405613 from Santa Cruz Biotechnology
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SRm160 HDR Plasmid (h) - sc-405613-HDR from Santa Cruz Biotechnology
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SRm160 Double Nickase Plasmid (h) - sc-405613-NIC from Santa Cruz Biotechnology
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SRm160 Double Nickase Plasmid (h2) - sc-405613-NIC-2 from Santa Cruz Biotechnology
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SRm160 CRISPR Activation Plasmid (h) - sc-405613-ACT from Santa Cruz Biotechnology
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SRm160 CRISPR Activation Plasmid (h2) - sc-405613-ACT-2 from Santa Cruz Biotechnology
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SRm160 Lentiviral Activation Particles (h) - sc-405613-LAC from Santa Cruz Biotechnology
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SRm160 Lentiviral Activation Particles (h2) - sc-405613-LAC-2 from Santa Cruz Biotechnology
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SRm160 siRNA (h) - sc-38335 from Santa Cruz Biotechnology
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SRm160 shRNA Plasmid (h) - sc-38335-SH from Santa Cruz Biotechnology
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SRm160 shRNA (h) Lentiviral Particles - sc-38335-V from Santa Cruz Biotechnology
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MISSION® esiRNA - EHU148531 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit - CKOZFN20591 from Sigma-Aldrich
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CompoZr® Knockout ZFN Kit, ZFN plasmid only - CKOZFND20591 from Sigma-Aldrich
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MISSION® 3′UTR Lenti GoClone™ - HUTR07545 from Sigma-Aldrich
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SRRM1 siRNA (Human) - CRH6937 from Cohesion Biosciences
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SRRM1 - MBS8213426 from MyBioSource
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shRNA set against Human SRRM1(NM_005839.3) - SHL035508 from Creative biogene
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Human SRRM1 siRNA - orb267439 from Biorbyt
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SRRM1 shRNA Plasmid (Human) - CHH6937 from Cohesion Biosciences
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SRRM1 miRNA 3'UTR clone - MiUTR1H-09915 from Creative biogene
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